Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915129.1_cds_XP_016465004.1_57990
CDS Infomation

[gene=LOC107787904] [db_xref=GeneID:107787904] [protein=serine/threonine-protein kinase ATG1c-like] [protein_id=XP_016465004.1] [location=complement(join(1996..2235,2524..2594,3129..3423,4946..5304,5433..5552,5826..6037,6121..6193,6428..6536,6659..6739,6828..6921,7158..7222,7882..7940,8061..8181,9105..9356))] [gbkey=CDS]
Sequence

ATGGCTCAATCGATGAGCAGAGGAGGGGGAAGGAGTGTGGTAGGGAACTATGTAGTGGGG
AAGCAAATCGGCGCCGGCTCTTTCTCGACGGTGTGGCATGCTCGGCACCGAGCTCACGGA
ACCGAAGTGGCTATTAAAGAGATCGTCACGGCTCGGCTTAATAATAAGCTTCAGGATAGT
CTCAAGTCCGAAATTGTAATTTTACAGAAGATCAATCATCCTAATATCATTCGCCTCCAC
GACATGATCGAGGAGGTGGGAAAAATATACATTATTTTGGAGTACTGTAGAGGAGGTGAT
CTTTCTATGTACATTCAACAACGACAAGGGAGAATTCCAGAAGCAACTGCAAAACATTTT
ATGCAGCAACTTGCATCTGGTTTAAAAATCCTCCGTGATAACAATCTAATACATAGGGAT
CTAAAGCCTCAGAATCTCCTCTTATCCTCGAACGATGACAGCTCCACCTTGAAGATTGCT
GATTTTGGGTTTGCAAGGTCTTTGCAGCCTAGGGGCCTTGCTGAAACACTATGTGGTTCA
CCATTGTACATGGCTCCAGAAATAATGCAACTTCAAAAGTATGATGCAAAGGCAGATCTC
TGGAGCGTTGGTGCCATCCTGTTTCAGCTTGTAACAGGCAAAACCCCGTTTACTGGAAAC
AATCAAATCCAGTTGCTCCAGAACATATTAAAGTCCACTGAATTGCTGTTTCCTCCAAAT
GCAAAAAATTTAAGTGCTAACTGCATAGATTTGTGTAAAAAATTGCTGCGCCGTAATCCA
GTGGAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCAGAGAAGCAGCCA
GATGAGCTGTCTTGGGATAGGAGACCTCAAAGGGTAATAGGTGGTTTTCCTATATCAGAA
GGCTATCCTGTGAGGAACAGAGAGGAAACTTTTCAAGAAGATGGTTTACCCTTTAGTCTA
GATGATGATTCCAGCGTTCCTGATGGTAGTCCTTCATTTGCTGGGAGATTACCACAGAGG
TTGTCACATGGATTTTCTTATGATGCAAAAGCTGAGAGGAAAGAAGGTTCTTGTAATACC
CCACACAAAACAGATAGTATTGGCTCGAGCCACAGACATACAGAAAGGAACATGAGGGAA
TCTATTAATTTGAAGGACCATAGGCAAGCTACTACTCGTTCAAAAGTGGTGGATTCGTTT
GAGTTGATTGATCAGGACTATGTCATTGTTTCTGGGCCCCCCATGGACTCATATTCTTCA
GCAGGTGCCTCTAGGCTTAGCAATATGCCATTCAGATCAAGCAGATCCCTGCAAGCGTCT
ACGATTTTAGATCCTAGACCAAGTGACCCGGTGCCTATTATTGGTCCTCCAACTAGTAGA
ATAGGTCATTTAGGAAGTTTGGAAAGTCCCTCATCTGCACCTGGAACTTCACAAGGATGC
ACAGATATCATAAACCGTTTGGAGCAGCCGCCAACTGATGGCATGGCCAGAATAGAGTCC
CTGCAACATTTTGCCTCTGCTATCATGGAGTTAGTGAATGAGAAGGTTGAGGCAAGCAGG
CATCTGGAAGCATTTTCAATTCAGCTAGTCAGTCTTGCTATATGGAAGCAAGCTTTGGAT
ATTTGTCATACGCAAGCGGCGTCGGCAATTGAAGGAAGTCCAAACCAAGAAACTATCAGA
TTGAGGGAAATCACGAAGAAAGGTCAAGCTAGTCTTAACATAAAAGAGCATCTTGATGCT
ACTAACATTTTGGGGCCGGAGAATGTATGCTCTCATATTGAAAAAGCATTTCTTAGTGAA
GTTGGTAATGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTGCCAGAT
GCAATGGAGATGATATTTCAATCTGCCCTGGCTTTGGGTAGAAAGGGAGCTGTTGATGAG
TACATGGGTCGGACTGAAAATGCAGTGGTATTTTATTCAAAAGCTGTGCGTTTGTTAAAA
TTCCTACAAGTGGAAGCACCATCTCTGATTTTAAATCCTCCATTTTCTCTAACAAACTCG
GATCGTTATAGGCTTCAAAATTACACTGATGTCCTCAATAACAGGCAAAGTGTTTCAAGG
TCTCAAATGATGGCTCTGCTTAAGTGTGAGGATCAACACTGCTCTCCTTAA

Peptide Sequence

PEP ID

XP_016465004.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase ATG1c-like [Nicotiana tabacum]
Sequence

MAQSMSRGGGRSVVGNYVVGKQIGAGSFSTVWHARHRAHGTEVAIKEIVTARLNNKLQDS
LKSEIVILQKINHPNIIRLHDMIEEVGKIYIILEYCRGGDLSMYIQQRQGRIPEATAKHF
MQQLASGLKILRDNNLIHRDLKPQNLLLSSNDDSSTLKIADFGFARSLQPRGLAETLCGS
PLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNILKSTELLFPPN
AKNLSANCIDLCKKLLRRNPVERLTFEEFFNHPFLAEKQPDELSWDRRPQRVIGGFPISE
GYPVRNREETFQEDGLPFSLDDDSSVPDGSPSFAGRLPQRLSHGFSYDAKAERKEGSCNT
PHKTDSIGSSHRHTERNMRESINLKDHRQATTRSKVVDSFELIDQDYVIVSGPPMDSYSS
AGASRLSNMPFRSSRSLQASTILDPRPSDPVPIIGPPTSRIGHLGSLESPSSAPGTSQGC
TDIINRLEQPPTDGMARIESLQHFASAIMELVNEKVEASRHLEAFSIQLVSLAIWKQALD
ICHTQAASAIEGSPNQETIRLREITKKGQASLNIKEHLDATNILGPENVCSHIEKAFLSE
VGNAEELAKHIEPGNTEVPDAMEMIFQSALALGRKGAVDEYMGRTENAVVFYSKAVRLLK
FLQVEAPSLILNPPFSLTNSDRYRLQNYTDVLNNRQSVSRSQMMALLKCEDQHCSP

Transcript Sequence

Gene sequence data has not been registered.